Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB38P57729 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 PGM5P2-202ENST00000637225 1043 ntBASIC16.22■□□□□ 0.19
RAB38P57729 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAB38P57729 LINC02012-201ENST00000608206 1725 ntBASIC16.22■□□□□ 0.19
RAB38P57729 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB38P57729 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB38P57729 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAB38P57729 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RAB38P57729 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
RAB38P57729 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
RAB38P57729 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB38P57729 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB38P57729 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB38P57729 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB38P57729 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB38P57729 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB38P57729 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
RAB38P57729 AL356488.2-201ENST00000602755 427 ntBASIC16.21■□□□□ 0.19
RAB38P57729 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB38P57729 AL805961.1-202ENST00000641562 540 ntBASIC16.21■□□□□ 0.19
RAB38P57729 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB38P57729 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.21■□□□□ 0.19
RAB38P57729 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB38P57729 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB38P57729 AP002414.3-201ENST00000589352 1468 ntBASIC16.21■□□□□ 0.19
RAB38P57729 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.21■□□□□ 0.19
RAB38P57729 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB38P57729 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB38P57729 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.21■□□□□ 0.18
RAB38P57729 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB38P57729 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.21■□□□□ 0.18
RAB38P57729 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAB38P57729 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RAB38P57729 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 AC108860.2-201ENST00000562760 2183 ntBASIC16.2■□□□□ 0.18
RAB38P57729 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAB38P57729 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 PTCHD3P3-201ENST00000403073 906 ntBASIC16.2■□□□□ 0.18
RAB38P57729 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB38P57729 AC092910.1-201ENST00000482027 1129 ntBASIC16.2■□□□□ 0.18
RAB38P57729 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB38P57729 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.2■□□□□ 0.18
RAB38P57729 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAB38P57729 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 AC005593.1-201ENST00000624894 515 ntBASIC16.2■□□□□ 0.18
RAB38P57729 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms