Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH15P55291 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.17■□□□□ 0.18
CDH15P55291 FAM207BP-201ENST00000447172 505 ntBASIC16.17■□□□□ 0.18
CDH15P55291 AC097488.1-201ENST00000507834 756 ntBASIC16.17■□□□□ 0.18
CDH15P55291 EGLN1P1-201ENST00000531623 762 ntBASIC16.17■□□□□ 0.18
CDH15P55291 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDH15P55291 AC009949.1-201ENST00000623048 1830 ntBASIC16.17■□□□□ 0.18
CDH15P55291 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH15P55291 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH15P55291 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.16■□□□□ 0.18
CDH15P55291 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 TSPY14P-201ENST00000303979 915 ntBASIC16.16■□□□□ 0.18
CDH15P55291 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 CRYGFP-201ENST00000418459 633 ntBASIC16.16■□□□□ 0.18
CDH15P55291 LIN28AP1-201ENST00000429574 405 ntBASIC16.16■□□□□ 0.18
CDH15P55291 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH15P55291 CKBP1-201ENST00000565489 1086 ntBASIC16.16■□□□□ 0.18
CDH15P55291 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH15P55291 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 AC016396.2-201ENST00000562575 1417 ntBASIC16.16■□□□□ 0.18
CDH15P55291 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH15P55291 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH15P55291 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH15P55291 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH15P55291 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH15P55291 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 AC092053.1-201ENST00000605787 1936 ntBASIC16.15■□□□□ 0.18
CDH15P55291 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH15P55291 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH15P55291 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.15■□□□□ 0.18
CDH15P55291 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDH15P55291 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 MCCD1P1-208ENST00000445732 328 ntBASIC16.15■□□□□ 0.18
CDH15P55291 AC128688.1-201ENST00000487626 519 ntBASIC16.15■□□□□ 0.18
CDH15P55291 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH15P55291 AC130371.2-201ENST00000619443 611 ntBASIC16.15■□□□□ 0.18
CDH15P55291 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 LINC02228-204ENST00000642115 2962 ntBASIC16.15■□□□□ 0.18
CDH15P55291 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH15P55291 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms