Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.12□□□□□ -0.15
CEACAM3P40198 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CEACAM3P40198 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.12□□□□□ -0.15
CEACAM3P40198 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.12□□□□□ -0.15
CEACAM3P40198 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.12□□□□□ -0.15
CEACAM3P40198 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 AC073592.4-201ENST00000623827 446 ntBASIC14.12□□□□□ -0.15
CEACAM3P40198 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.12□□□□□ -0.15
CEACAM3P40198 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CEACAM3P40198 PKD1P5-201ENST00000532415 10291 ntBASIC14.12□□□□□ -0.15
CEACAM3P40198 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.12□□□□□ -0.15
CEACAM3P40198 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CEACAM3P40198 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CEACAM3P40198 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.11□□□□□ -0.15
CEACAM3P40198 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.11□□□□□ -0.15
CEACAM3P40198 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 PRYP5-201ENST00000451909 266 ntBASIC14.11□□□□□ -0.15
CEACAM3P40198 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.11□□□□□ -0.15
CEACAM3P40198 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 AC073648.2-201ENST00000510116 352 ntBASIC14.11□□□□□ -0.15
CEACAM3P40198 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.11□□□□□ -0.15
CEACAM3P40198 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 AC064862.7-201ENST00000604520 867 ntBASIC14.11□□□□□ -0.15
CEACAM3P40198 AL022326.1-202ENST00000641533 845 ntBASIC14.11□□□□□ -0.15
CEACAM3P40198 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CEACAM3P40198 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CEACAM3P40198 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CEACAM3P40198 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.1□□□□□ -0.15
CEACAM3P40198 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.1□□□□□ -0.15
CEACAM3P40198 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms