Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 AL031284.1-201ENST00000419297 478 ntBASIC17.17■□□□□ 0.34
HMGCLP35914 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGCLP35914 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.17■□□□□ 0.34
HMGCLP35914 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGCLP35914 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 FAM215A-202ENST00000632077 792 ntBASIC17.17■□□□□ 0.34
HMGCLP35914 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGCLP35914 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGCLP35914 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HMGCLP35914 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGCLP35914 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HMGCLP35914 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGCLP35914 AC006504.4-201ENST00000592118 1568 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 AC106820.2-201ENST00000563775 3264 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 AC009078.2-202ENST00000463353 338 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 RNA5SP419-201ENST00000515908 135 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCLP35914 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCLP35914 AC105339.3-201ENST00000560043 636 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 AL121894.2-201ENST00000602977 491 ntBASIC17.16■□□□□ 0.34
HMGCLP35914 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCLP35914 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
HMGCLP35914 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCLP35914 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 AC092053.1-201ENST00000605787 1936 ntBASIC17.15■□□□□ 0.34
HMGCLP35914 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.15■□□□□ 0.34
HMGCLP35914 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HMGCLP35914 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 ELK2BP-201ENST00000415014 1224 ntBASIC17.15■□□□□ 0.34
HMGCLP35914 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGCLP35914 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
HMGCLP35914 AC136632.2-201ENST00000512891 861 ntBASIC17.15■□□□□ 0.34
HMGCLP35914 AC012640.2-201ENST00000561606 901 ntBASIC17.15■□□□□ 0.34
HMGCLP35914 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMGCLP35914 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.15■□□□□ 0.34
HMGCLP35914 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCLP35914 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCLP35914 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms