Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLCN1P35523 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCN1P35523 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 MIR149-201ENST00000384879 89 ntBASIC19.67■□□□□ 0.74
CLCN1P35523 HMGA1P5-201ENST00000412453 271 ntBASIC19.67■□□□□ 0.74
CLCN1P35523 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.67■□□□□ 0.74
CLCN1P35523 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CLCN1P35523 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CLCN1P35523 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN1P35523 AC009947.2-201ENST00000444014 672 ntBASIC19.66■□□□□ 0.74
CLCN1P35523 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCN1P35523 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCN1P35523 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 AC009102.3-201ENST00000623118 1491 ntBASIC19.66■□□□□ 0.74
CLCN1P35523 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 AL009178.2-201ENST00000597278 2719 ntBASIC19.66■□□□□ 0.74
CLCN1P35523 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCN1P35523 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLCN1P35523 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.65■□□□□ 0.74
CLCN1P35523 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.65■□□□□ 0.74
CLCN1P35523 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCN1P35523 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 AC145285.6-201ENST00000604632 637 ntBASIC19.65■□□□□ 0.74
CLCN1P35523 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms