Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.37■□□□□ 0.37
LSP1P33241 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.37■□□□□ 0.37
LSP1P33241 CR392000.1-201ENST00000624770 1228 ntBASIC17.37■□□□□ 0.37
LSP1P33241 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.37■□□□□ 0.37
LSP1P33241 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.37■□□□□ 0.37
LSP1P33241 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.37■□□□□ 0.37
LSP1P33241 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
LSP1P33241 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.37■□□□□ 0.37
LSP1P33241 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
LSP1P33241 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.37■□□□□ 0.37
LSP1P33241 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSP1P33241 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LSP1P33241 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LSP1P33241 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LSP1P33241 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 FAM201B-201ENST00000458407 597 ntBASIC17.36■□□□□ 0.37
LSP1P33241 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.36■□□□□ 0.37
LSP1P33241 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.36■□□□□ 0.37
LSP1P33241 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSP1P33241 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
LSP1P33241 CA15P1-201ENST00000481698 905 ntBASIC17.35■□□□□ 0.37
LSP1P33241 UNC93B5-201ENST00000530315 699 ntBASIC17.35■□□□□ 0.37
LSP1P33241 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LSP1P33241 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.35■□□□□ 0.37
LSP1P33241 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSP1P33241 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.35■□□□□ 0.37
LSP1P33241 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
LSP1P33241 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms