Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-FP30511 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-FP30511 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 AC016396.2-201ENST00000562575 1417 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 AC129492.6-201ENST00000611383 1305 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
HLA-FP30511 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-FP30511 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-FP30511 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HLA-FP30511 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.46■□□□□ 0.39
HLA-FP30511 AC092183.1-201ENST00000469884 875 ntBASIC17.46■□□□□ 0.39
HLA-FP30511 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-FP30511 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-FP30511 AC107918.2-201ENST00000530817 355 ntBASIC17.46■□□□□ 0.39
HLA-FP30511 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
HLA-FP30511 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 AL078644.1-201ENST00000609881 752 ntBASIC17.46■□□□□ 0.39
HLA-FP30511 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-FP30511 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-FP30511 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HLA-FP30511 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-FP30511 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-FP30511 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-FP30511 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 EGFEM1P-202ENST00000431685 1563 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 AC093525.9-201ENST00000624961 1746 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.45■□□□□ 0.38
HLA-FP30511 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 AC211486.1-202ENST00000416371 468 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-FP30511 RPS8P6-201ENST00000426177 609 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 AC074386.1-202ENST00000463561 864 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 AC211476.1-201ENST00000503899 468 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-FP30511 MIR4469-201ENST00000583919 79 ntBASIC17.45■□□□□ 0.38
HLA-FP30511 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-FP30511 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-FP30511 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-FP30511 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-FP30511 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-FP30511 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-FP30511 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-FP30511 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-FP30511 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-FP30511 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-FP30511 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-FP30511 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-FP30511 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms