Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP8P22894 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP8P22894 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP8P22894 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 SAPCD2P3-201ENST00000455031 850 ntBASIC18.14■□□□□ 0.49
MMP8P22894 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MMP8P22894 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP8P22894 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP8P22894 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP8P22894 AC064862.7-201ENST00000604520 867 ntBASIC18.14■□□□□ 0.49
MMP8P22894 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MMP8P22894 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MMP8P22894 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP8P22894 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.49
MMP8P22894 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP8P22894 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MMP8P22894 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MMP8P22894 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MMP8P22894 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP8P22894 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.13■□□□□ 0.49
MMP8P22894 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 AF238378.1-201ENST00000526806 358 ntBASIC18.13■□□□□ 0.49
MMP8P22894 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP8P22894 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 LINC01711-201ENST00000598340 967 ntBASIC18.13■□□□□ 0.49
MMP8P22894 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MMP8P22894 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 NCF1C-201ENST00000438382 1427 ntBASIC18.13■□□□□ 0.49
MMP8P22894 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP8P22894 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP8P22894 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.12■□□□□ 0.49
MMP8P22894 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.12■□□□□ 0.49
MMP8P22894 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MMP8P22894 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.12■□□□□ 0.49
MMP8P22894 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.12■□□□□ 0.49
MMP8P22894 IFNL4P1-201ENST00000607083 540 ntBASIC18.12■□□□□ 0.49
MMP8P22894 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.12■□□□□ 0.49
MMP8P22894 AL589182.2-201ENST00000619332 1049 ntBASIC18.12■□□□□ 0.49
MMP8P22894 AL590787.1-201ENST00000568856 1315 ntBASIC18.12■□□□□ 0.49
MMP8P22894 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
MMP8P22894 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.12■□□□□ 0.49
MMP8P22894 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP8P22894 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MMP8P22894 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP8P22894 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP8P22894 AGGF1P2-201ENST00000426656 2106 ntBASIC18.11■□□□□ 0.49
MMP8P22894 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms