Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR4A1P22736 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.12■□□□□ 0.17
NR4A1P22736 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 MIR564-202ENST00000385049 94 ntBASIC16.11■□□□□ 0.17
NR4A1P22736 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.11■□□□□ 0.17
NR4A1P22736 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 AC063952.2-201ENST00000498792 1227 ntBASIC16.11■□□□□ 0.17
NR4A1P22736 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.11■□□□□ 0.17
NR4A1P22736 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR4A1P22736 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.11■□□□□ 0.17
NR4A1P22736 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.11■□□□□ 0.17
NR4A1P22736 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NR4A1P22736 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
NR4A1P22736 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.1■□□□□ 0.17
NR4A1P22736 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.1■□□□□ 0.17
NR4A1P22736 AL441883.1-201ENST00000566170 1045 ntBASIC16.1■□□□□ 0.17
NR4A1P22736 LINC01238-205ENST00000567549 1107 ntBASIC16.1■□□□□ 0.17
NR4A1P22736 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NR4A1P22736 LINC00304-203ENST00000565008 1864 ntBASIC16.1■□□□□ 0.17
NR4A1P22736 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR4A1P22736 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR4A1P22736 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
NR4A1P22736 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR4A1P22736 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR4A1P22736 SDHAP2-201ENST00000455183 2001 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms