Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 LINC02012-201ENST00000608206 1725 ntBASIC17.45■□□□□ 0.38
HLA-DPA1P20036 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 PRYP5-201ENST00000451909 266 ntBASIC17.45■□□□□ 0.38
HLA-DPA1P20036 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 MTDHP3-201ENST00000594186 672 ntBASIC17.45■□□□□ 0.38
HLA-DPA1P20036 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 EGFEM1P-202ENST00000431685 1563 ntBASIC17.45■□□□□ 0.38
HLA-DPA1P20036 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPA1P20036 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
HLA-DPA1P20036 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 KRT126P-201ENST00000549467 1181 ntBASIC17.44■□□□□ 0.38
HLA-DPA1P20036 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 AC008608.2-201ENST00000606089 416 ntBASIC17.44■□□□□ 0.38
HLA-DPA1P20036 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 AL356309.3-201ENST00000624132 1934 ntBASIC17.44■□□□□ 0.38
HLA-DPA1P20036 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 PKD1P5-201ENST00000532415 10291 ntBASIC17.44■□□□□ 0.38
HLA-DPA1P20036 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPA1P20036 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.43■□□□□ 0.38
HLA-DPA1P20036 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms