Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
NCLP19338 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.61■□□□□ 0.89
NCLP19338 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.61■□□□□ 0.89
NCLP19338 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 AL031133.1-201ENST00000406807 723 ntBASIC20.61■□□□□ 0.89
NCLP19338 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.61■□□□□ 0.89
NCLP19338 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.61■□□□□ 0.89
NCLP19338 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.61■□□□□ 0.89
NCLP19338 NEK4P2-201ENST00000580004 1012 ntBASIC20.61■□□□□ 0.89
NCLP19338 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 AC008687.5-201ENST00000593746 558 ntBASIC20.61■□□□□ 0.89
NCLP19338 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
NCLP19338 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NCLP19338 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLP19338 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLP19338 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
NCLP19338 AP000523.1-201ENST00000398242 1049 ntBASIC20.6■□□□□ 0.89
NCLP19338 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.6■□□□□ 0.89
NCLP19338 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.6■□□□□ 0.89
NCLP19338 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.6■□□□□ 0.89
NCLP19338 MIR3917-201ENST00000580971 93 ntBASIC20.6■□□□□ 0.89
NCLP19338 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
NCLP19338 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 LINC01451-201ENST00000623792 534 ntBASIC20.6■□□□□ 0.89
NCLP19338 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLP19338 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLP19338 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLP19338 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms