Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 AC016396.2-201ENST00000562575 1417 ntBASIC19.4■□□□□ 0.7
COL11A1P12107 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.39■□□□□ 0.7
COL11A1P12107 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
COL11A1P12107 AC092580.3-201ENST00000430932 139 ntBASIC19.39■□□□□ 0.7
COL11A1P12107 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL11A1P12107 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
COL11A1P12107 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
COL11A1P12107 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.39■□□□□ 0.7
COL11A1P12107 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.39■□□□□ 0.69
COL11A1P12107 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.39■□□□□ 0.69
COL11A1P12107 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.39■□□□□ 0.69
COL11A1P12107 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 UXT-AS1-201ENST00000590504 1525 ntBASIC19.39■□□□□ 0.69
COL11A1P12107 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL11A1P12107 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.39■□□□□ 0.69
COL11A1P12107 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL11A1P12107 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COL11A1P12107 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL11A1P12107 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 PMS2P4-201ENST00000412466 1052 ntBASIC19.38■□□□□ 0.69
COL11A1P12107 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.38■□□□□ 0.69
COL11A1P12107 COX20P2-201ENST00000452636 358 ntBASIC19.38■□□□□ 0.69
COL11A1P12107 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.38■□□□□ 0.69
COL11A1P12107 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.38■□□□□ 0.69
COL11A1P12107 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.38■□□□□ 0.69
COL11A1P12107 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL11A1P12107 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 LINC00896-202ENST00000609602 2128 ntBASIC19.38■□□□□ 0.69
COL11A1P12107 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL11A1P12107 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL11A1P12107 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
COL11A1P12107 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COL11A1P12107 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.37■□□□□ 0.69
COL11A1P12107 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 AC025678.2-201ENST00000562061 970 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 AC140878.1-201ENST00000565277 250 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.37■□□□□ 0.69
COL11A1P12107 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms