Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.9■□□□□ 0.46
CD48P09326 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.9■□□□□ 0.46
CD48P09326 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.9■□□□□ 0.46
CD48P09326 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.9■□□□□ 0.46
CD48P09326 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.9■□□□□ 0.46
CD48P09326 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.9■□□□□ 0.46
CD48P09326 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.9■□□□□ 0.46
CD48P09326 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.9■□□□□ 0.46
CD48P09326 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 RNF216P1-203ENST00000404404 2427 ntBASIC17.9■□□□□ 0.46
CD48P09326 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD48P09326 FLJ38576-201ENST00000623820 2459 ntBASIC17.9■□□□□ 0.46
CD48P09326 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 SIGLEC16-201ENST00000599858 1437 ntBASIC17.89■□□□□ 0.46
CD48P09326 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.89■□□□□ 0.45
CD48P09326 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.89■□□□□ 0.45
CD48P09326 SIGLEC30P-201ENST00000455569 941 ntBASIC17.89■□□□□ 0.45
CD48P09326 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.89■□□□□ 0.45
CD48P09326 AC073592.4-201ENST00000623827 446 ntBASIC17.89■□□□□ 0.45
CD48P09326 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.89■□□□□ 0.45
CD48P09326 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CD48P09326 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CD48P09326 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD48P09326 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.89■□□□□ 0.45
CD48P09326 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD48P09326 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.88■□□□□ 0.45
CD48P09326 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CD48P09326 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 BX005266.1-201ENST00000473402 457 ntBASIC17.88■□□□□ 0.45
CD48P09326 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.88■□□□□ 0.45
CD48P09326 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.88■□□□□ 0.45
CD48P09326 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CD48P09326 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.88■□□□□ 0.45
CD48P09326 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 AC012313.10-201ENST00000623509 926 ntBASIC17.88■□□□□ 0.45
CD48P09326 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CD48P09326 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CD48P09326 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 AC097637.2-201ENST00000624096 1997 ntBASIC17.88■□□□□ 0.45
CD48P09326 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.88■□□□□ 0.45
CD48P09326 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD48P09326 FRMD8P1-201ENST00000440433 1524 ntBASIC17.88■□□□□ 0.45
CD48P09326 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
CD48P09326 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CD48P09326 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.87■□□□□ 0.45
CD48P09326 KRT18P31-201ENST00000506277 1292 ntBASIC17.87■□□□□ 0.45
CD48P09326 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms