Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 AL590787.1-201ENST00000568856 1315 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 KRT18P67-201ENST00000432816 1264 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 TPM4P1-201ENST00000436100 807 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 OR7E14P-202ENST00000530490 1290 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 AL160237.2-201ENST00000556165 472 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 AL121894.2-201ENST00000602977 491 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 AC004706.3-202ENST00000621574 984 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 AC107918.4-202ENST00000641623 219 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 AC092053.1-201ENST00000605787 1936 ntBASIC18.56■□□□□ 0.56
HLA-DRAP01903 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRAP01903 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DRAP01903 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 LAGE3P1-201ENST00000425356 484 ntBASIC18.55■□□□□ 0.56
HLA-DRAP01903 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 AF186996.4-201ENST00000467186 377 ntBASIC18.55■□□□□ 0.56
HLA-DRAP01903 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DRAP01903 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DRAP01903 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 GPR89P-201ENST00000407924 1495 ntBASIC18.54■□□□□ 0.56
HLA-DRAP01903 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DRAP01903 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DRAP01903 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms