Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.43■□□□□ 0.06
CYTIPO60759 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.43■□□□□ 0.06
CYTIPO60759 AL139424.1-201ENST00000607572 797 ntBASIC15.43■□□□□ 0.06
CYTIPO60759 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.43■□□□□ 0.06
CYTIPO60759 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.43■□□□□ 0.06
CYTIPO60759 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.43■□□□□ 0.06
CYTIPO60759 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.43■□□□□ 0.06
CYTIPO60759 AC008735.5-201ENST00000623544 497 ntBASIC15.43■□□□□ 0.06
CYTIPO60759 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.43■□□□□ 0.06
CYTIPO60759 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.43■□□□□ 0.06
CYTIPO60759 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CYTIPO60759 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.43■□□□□ 0.06
CYTIPO60759 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.43■□□□□ 0.06
CYTIPO60759 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CYTIPO60759 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CYTIPO60759 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.42■□□□□ 0.06
CYTIPO60759 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.42■□□□□ 0.06
CYTIPO60759 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.42■□□□□ 0.06
CYTIPO60759 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.42■□□□□ 0.06
CYTIPO60759 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.42■□□□□ 0.06
CYTIPO60759 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.42■□□□□ 0.06
CYTIPO60759 AL353135.1-201ENST00000606729 504 ntBASIC15.42■□□□□ 0.06
CYTIPO60759 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 MIR7706-201ENST00000613747 67 ntBASIC15.42■□□□□ 0.06
CYTIPO60759 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CYTIPO60759 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CYTIPO60759 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CYTIPO60759 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CYTIPO60759 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CYTIPO60759 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CYTIPO60759 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CYTIPO60759 KRT18P27-201ENST00000427733 1299 ntBASIC15.41■□□□□ 0.06
CYTIPO60759 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.41■□□□□ 0.06
CYTIPO60759 AC105339.3-201ENST00000560043 636 ntBASIC15.41■□□□□ 0.06
CYTIPO60759 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.41■□□□□ 0.06
CYTIPO60759 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CYTIPO60759 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.41■□□□□ 0.06
CYTIPO60759 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.41■□□□□ 0.06
CYTIPO60759 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
CYTIPO60759 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.41■□□□□ 0.06
CYTIPO60759 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CYTIPO60759 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.41■□□□□ 0.06
CYTIPO60759 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CYTIPO60759 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms