Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LCMT2O60294 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.24
LCMT2O60294 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.52■□□□□ 0.24
LCMT2O60294 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.52■□□□□ 0.24
LCMT2O60294 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LCMT2O60294 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.52■□□□□ 0.24
LCMT2O60294 AF186996.4-201ENST00000467186 377 ntBASIC16.52■□□□□ 0.24
LCMT2O60294 OR7E14P-202ENST00000530490 1290 ntBASIC16.52■□□□□ 0.24
LCMT2O60294 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.52■□□□□ 0.24
LCMT2O60294 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.52■□□□□ 0.24
LCMT2O60294 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.52■□□□□ 0.24
LCMT2O60294 AC004706.3-202ENST00000621574 984 ntBASIC16.52■□□□□ 0.24
LCMT2O60294 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.52■□□□□ 0.24
LCMT2O60294 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.52■□□□□ 0.23
LCMT2O60294 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LCMT2O60294 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LCMT2O60294 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LCMT2O60294 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.52■□□□□ 0.23
LCMT2O60294 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LCMT2O60294 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 AL590787.1-201ENST00000568856 1315 ntBASIC16.51■□□□□ 0.23
LCMT2O60294 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.51■□□□□ 0.23
LCMT2O60294 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.51■□□□□ 0.23
LCMT2O60294 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LCMT2O60294 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.51■□□□□ 0.23
LCMT2O60294 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LCMT2O60294 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.51■□□□□ 0.23
LCMT2O60294 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.51■□□□□ 0.23
LCMT2O60294 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
LCMT2O60294 AC012640.2-201ENST00000561606 901 ntBASIC16.51■□□□□ 0.23
LCMT2O60294 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.51■□□□□ 0.23
LCMT2O60294 AC080080.1-201ENST00000625121 2420 ntBASIC16.51■□□□□ 0.23
LCMT2O60294 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LCMT2O60294 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCMT2O60294 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.51■□□□□ 0.23
LCMT2O60294 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LCMT2O60294 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.5■□□□□ 0.23
LCMT2O60294 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LCMT2O60294 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LCMT2O60294 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LCMT2O60294 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.5■□□□□ 0.23
LCMT2O60294 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
LCMT2O60294 RNA5SP419-201ENST00000515908 135 ntBASIC16.5■□□□□ 0.23
LCMT2O60294 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.5■□□□□ 0.23
LCMT2O60294 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.5■□□□□ 0.23
LCMT2O60294 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.5■□□□□ 0.23
LCMT2O60294 SLC25A6P4-201ENST00000586535 553 ntBASIC16.5■□□□□ 0.23
LCMT2O60294 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.5■□□□□ 0.23
LCMT2O60294 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 AC092053.1-201ENST00000605787 1936 ntBASIC16.5■□□□□ 0.23
LCMT2O60294 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
LCMT2O60294 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 LINC02012-201ENST00000608206 1725 ntBASIC16.5■□□□□ 0.23
LCMT2O60294 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms