Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDH7O60245 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH7O60245 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH7O60245 ATP5G2P1-201ENST00000433580 426 ntBASIC16.52■□□□□ 0.24
PCDH7O60245 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDH7O60245 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 AC099336.1-202ENST00000602961 463 ntBASIC16.52■□□□□ 0.24
PCDH7O60245 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 AC092053.1-201ENST00000605787 1936 ntBASIC16.52■□□□□ 0.23
PCDH7O60245 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH7O60245 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH7O60245 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDH7O60245 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH7O60245 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH7O60245 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH7O60245 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 AC124067.4-201ENST00000519691 2379 ntBASIC16.51■□□□□ 0.23
PCDH7O60245 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH7O60245 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH7O60245 POM121L3P-201ENST00000419331 1163 ntBASIC16.51■□□□□ 0.23
PCDH7O60245 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH7O60245 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH7O60245 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH7O60245 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 AC010331.1-201ENST00000611423 582 ntBASIC16.51■□□□□ 0.23
PCDH7O60245 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH7O60245 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDH7O60245 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH7O60245 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 EGFEM1P-202ENST00000431685 1563 ntBASIC16.51■□□□□ 0.23
PCDH7O60245 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH7O60245 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH7O60245 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH7O60245 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH7O60245 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 AC093458.2-201ENST00000623150 629 ntBASIC16.5■□□□□ 0.23
PCDH7O60245 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 PMPCAP1-201ENST00000508114 1576 ntBASIC16.5■□□□□ 0.23
PCDH7O60245 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 CROCCP1-201ENST00000426910 5675 ntBASIC16.5■□□□□ 0.23
PCDH7O60245 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms