Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.71■□□□□ 0.59
EXTL3O43909 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EXTL3O43909 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.71■□□□□ 0.59
EXTL3O43909 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.71■□□□□ 0.59
EXTL3O43909 PTCHD3P3-201ENST00000403073 906 ntBASIC18.71■□□□□ 0.59
EXTL3O43909 AL590627.1-203ENST00000421194 1026 ntBASIC18.71■□□□□ 0.59
EXTL3O43909 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.71■□□□□ 0.59
EXTL3O43909 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.71■□□□□ 0.59
EXTL3O43909 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EXTL3O43909 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.71■□□□□ 0.59
EXTL3O43909 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.71■□□□□ 0.59
EXTL3O43909 AL356488.2-201ENST00000602755 427 ntBASIC18.71■□□□□ 0.59
EXTL3O43909 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
EXTL3O43909 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
EXTL3O43909 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.71■□□□□ 0.58
EXTL3O43909 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
EXTL3O43909 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.7■□□□□ 0.58
EXTL3O43909 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
EXTL3O43909 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.7■□□□□ 0.58
EXTL3O43909 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
EXTL3O43909 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.7■□□□□ 0.58
EXTL3O43909 BX640515.1-201ENST00000617215 977 ntBASIC18.7■□□□□ 0.58
EXTL3O43909 MIR1199-201ENST00000621445 119 ntBASIC18.7■□□□□ 0.58
EXTL3O43909 AC116407.3-201ENST00000623905 1129 ntBASIC18.7■□□□□ 0.58
EXTL3O43909 AL805961.1-202ENST00000641562 540 ntBASIC18.7■□□□□ 0.58
EXTL3O43909 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
EXTL3O43909 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXTL3O43909 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.69■□□□□ 0.58
EXTL3O43909 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.69■□□□□ 0.58
EXTL3O43909 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.69■□□□□ 0.58
EXTL3O43909 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.69■□□□□ 0.58
EXTL3O43909 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
EXTL3O43909 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 PGM5P2-202ENST00000637225 1043 ntBASIC18.69■□□□□ 0.58
EXTL3O43909 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EXTL3O43909 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms