Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.41■□□□□ 0.38
SMAD6O43541 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD6O43541 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.4■□□□□ 0.38
SMAD6O43541 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMAD6O43541 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMAD6O43541 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD6O43541 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SMAD6O43541 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.4■□□□□ 0.38
SMAD6O43541 RNA5SP416-201ENST00000516838 111 ntBASIC17.4■□□□□ 0.38
SMAD6O43541 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
SMAD6O43541 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.4■□□□□ 0.38
SMAD6O43541 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMAD6O43541 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMAD6O43541 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD6O43541 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD6O43541 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD6O43541 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SMAD6O43541 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD6O43541 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.39■□□□□ 0.38
SMAD6O43541 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.39■□□□□ 0.38
SMAD6O43541 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD6O43541 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 SLC25A6P2-201ENST00000497974 877 ntBASIC17.39■□□□□ 0.37
SMAD6O43541 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.39■□□□□ 0.37
SMAD6O43541 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.39■□□□□ 0.37
SMAD6O43541 AC018845.2-201ENST00000568326 409 ntBASIC17.39■□□□□ 0.37
SMAD6O43541 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD6O43541 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD6O43541 EGFEM1P-202ENST00000431685 1563 ntBASIC17.39■□□□□ 0.37
SMAD6O43541 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD6O43541 AC139713.2-201ENST00000641328 2723 ntBASIC17.39■□□□□ 0.37
SMAD6O43541 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD6O43541 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD6O43541 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMAD6O43541 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
SMAD6O43541 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SMAD6O43541 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 AC023274.1-201ENST00000418278 595 ntBASIC17.38■□□□□ 0.37
SMAD6O43541 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD6O43541 AC087163.2-201ENST00000457299 853 ntBASIC17.38■□□□□ 0.37
SMAD6O43541 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.38■□□□□ 0.37
SMAD6O43541 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD6O43541 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.38■□□□□ 0.37
SMAD6O43541 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD6O43541 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms