Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 AC139713.2-201ENST00000641328 2723 ntBASIC17.93■□□□□ 0.46
MSI1O43347 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.92■□□□□ 0.46
MSI1O43347 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MSI1O43347 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MSI1O43347 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 AC108751.1-201ENST00000490852 363 ntBASIC17.92■□□□□ 0.46
MSI1O43347 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 AC106730.1-201ENST00000566722 1090 ntBASIC17.92■□□□□ 0.46
MSI1O43347 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.92■□□□□ 0.46
MSI1O43347 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.92■□□□□ 0.46
MSI1O43347 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MSI1O43347 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MSI1O43347 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MSI1O43347 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
MSI1O43347 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.91■□□□□ 0.46
MSI1O43347 AC108073.2-201ENST00000464002 357 ntBASIC17.91■□□□□ 0.46
MSI1O43347 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.91■□□□□ 0.46
MSI1O43347 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.91■□□□□ 0.46
MSI1O43347 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.91■□□□□ 0.46
MSI1O43347 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MSI1O43347 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.91■□□□□ 0.46
MSI1O43347 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.9■□□□□ 0.46
MSI1O43347 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
MSI1O43347 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.9■□□□□ 0.46
MSI1O43347 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 AC008667.4-201ENST00000607370 168 ntBASIC17.9■□□□□ 0.46
MSI1O43347 PGM5P2-202ENST00000637225 1043 ntBASIC17.9■□□□□ 0.46
MSI1O43347 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.9■□□□□ 0.46
MSI1O43347 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 ZNF259P1-201ENST00000407656 1365 ntBASIC17.9■□□□□ 0.46
MSI1O43347 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms