Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
PHF1O43189 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PHF1O43189 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PHF1O43189 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.99□□□□□ -0.01
PHF1O43189 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHF1O43189 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.98□□□□□ -0.01
PHF1O43189 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PHF1O43189 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PHF1O43189 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.98□□□□□ -0.01
PHF1O43189 PMS2P2-201ENST00000425039 1128 ntBASIC14.98□□□□□ -0.01
PHF1O43189 AC073648.2-201ENST00000510116 352 ntBASIC14.98□□□□□ -0.01
PHF1O43189 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.98□□□□□ -0.01
PHF1O43189 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.98□□□□□ -0.01
PHF1O43189 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.98□□□□□ -0.01
PHF1O43189 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.98□□□□□ -0.01
PHF1O43189 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 AC022211.2-201ENST00000585075 2527 ntBASIC14.98□□□□□ -0.01
PHF1O43189 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PHF1O43189 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PHF1O43189 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.98□□□□□ -0.01
PHF1O43189 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PHF1O43189 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 AC093010.1-201ENST00000473625 1624 ntBASIC14.97□□□□□ -0.01
PHF1O43189 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PHF1O43189 MINOS1P3-201ENST00000457048 203 ntBASIC14.97□□□□□ -0.01
PHF1O43189 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.97□□□□□ -0.01
PHF1O43189 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.97□□□□□ -0.01
PHF1O43189 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.97□□□□□ -0.01
PHF1O43189 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 ZNF259P1-201ENST00000407656 1365 ntBASIC14.97□□□□□ -0.01
PHF1O43189 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 AP001094.4-201ENST00000579008 2176 ntBASIC14.97□□□□□ -0.01
PHF1O43189 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 NSUN5P1-202ENST00000421140 1535 ntBASIC14.97□□□□□ -0.01
PHF1O43189 NSUN5P2-203ENST00000457352 1529 ntBASIC14.97□□□□□ -0.01
PHF1O43189 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.97□□□□□ -0.01
PHF1O43189 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PHF1O43189 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PHF1O43189 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms