Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA3EO15041 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3EO15041 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA3EO15041 AL133373.2-201ENST00000623187 2828 ntBASIC20.68■□□□□ 0.9
SEMA3EO15041 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SEMA3EO15041 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA3EO15041 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.67■□□□□ 0.9
SEMA3EO15041 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SEMA3EO15041 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.67■□□□□ 0.9
SEMA3EO15041 AC112191.1-201ENST00000523689 701 ntBASIC20.67■□□□□ 0.9
SEMA3EO15041 SNHG9-202ENST00000564014 471 ntBASIC20.67■□□□□ 0.9
SEMA3EO15041 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA3EO15041 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA3EO15041 MIR4515-201ENST00000584082 81 ntBASIC20.67■□□□□ 0.9
SEMA3EO15041 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA3EO15041 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA3EO15041 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA3EO15041 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA3EO15041 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3EO15041 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 AC018470.1-201ENST00000624790 3129 ntBASIC20.66■□□□□ 0.9
SEMA3EO15041 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3EO15041 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.66■□□□□ 0.9
SEMA3EO15041 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3EO15041 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3EO15041 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3EO15041 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SEMA3EO15041 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA3EO15041 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SEMA3EO15041 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3EO15041 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA3EO15041 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
SEMA3EO15041 AC140658.5-201ENST00000438532 169 ntBASIC20.65■□□□□ 0.9
SEMA3EO15041 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3EO15041 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.65■□□□□ 0.9
SEMA3EO15041 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SEMA3EO15041 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.65■□□□□ 0.9
SEMA3EO15041 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SEMA3EO15041 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA3EO15041 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3EO15041 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3EO15041 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3EO15041 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SEMA3EO15041 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA3EO15041 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA3EO15041 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.64■□□□□ 0.9
SEMA3EO15041 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SEMA3EO15041 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SEMA3EO15041 AC092919.2-201ENST00000623631 1645 ntBASIC20.64■□□□□ 0.9
SEMA3EO15041 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
SEMA3EO15041 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.64■□□□□ 0.9
SEMA3EO15041 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3EO15041 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SEMA3EO15041 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3EO15041 AC002056.1-201ENST00000395613 760 ntBASIC20.64■□□□□ 0.89
SEMA3EO15041 CNN2P11-201ENST00000429351 262 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms