Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK2O00526 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.88□□□□□ -0.19
UPK2O00526 AL135999.2-201ENST00000622438 1686 ntBASIC13.88□□□□□ -0.19
UPK2O00526 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK2O00526 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK2O00526 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.88□□□□□ -0.19
UPK2O00526 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UPK2O00526 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 AC003669.1-201ENST00000334569 611 ntBASIC13.87□□□□□ -0.19
UPK2O00526 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.87□□□□□ -0.19
UPK2O00526 AL031133.1-201ENST00000406807 723 ntBASIC13.87□□□□□ -0.19
UPK2O00526 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 AC091607.1-201ENST00000490318 1060 ntBASIC13.87□□□□□ -0.19
UPK2O00526 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.87□□□□□ -0.19
UPK2O00526 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.87□□□□□ -0.19
UPK2O00526 NTF6B-201ENST00000591913 560 ntBASIC13.87□□□□□ -0.19
UPK2O00526 AC011467.2-201ENST00000598425 242 ntBASIC13.87□□□□□ -0.19
UPK2O00526 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.87□□□□□ -0.19
UPK2O00526 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.87□□□□□ -0.19
UPK2O00526 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
UPK2O00526 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK2O00526 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UPK2O00526 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK2O00526 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UPK2O00526 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 FLJ38576-201ENST00000623820 2459 ntBASIC13.86□□□□□ -0.19
UPK2O00526 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK2O00526 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
UPK2O00526 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK2O00526 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK2O00526 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK2O00526 AD001527.2-201ENST00000622994 785 ntBASIC13.86□□□□□ -0.19
UPK2O00526 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
UPK2O00526 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UPK2O00526 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK2O00526 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK2O00526 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms