Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDX39AO00148 PMS2P7-201ENST00000506558 1336 ntBASIC19.42■□□□□ 0.7
DDX39AO00148 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DDX39AO00148 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX39AO00148 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
DDX39AO00148 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX39AO00148 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX39AO00148 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX39AO00148 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 AC064836.3-201ENST00000607928 673 ntBASIC19.41■□□□□ 0.7
DDX39AO00148 AC023511.2-201ENST00000618803 211 ntBASIC19.41■□□□□ 0.7
DDX39AO00148 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX39AO00148 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
DDX39AO00148 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX39AO00148 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 AC005332.8-201ENST00000622750 2735 ntBASIC19.4■□□□□ 0.7
DDX39AO00148 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX39AO00148 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX39AO00148 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.4■□□□□ 0.7
DDX39AO00148 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX39AO00148 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX39AO00148 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX39AO00148 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX39AO00148 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 FAM197Y3-203ENST00000618346 717 ntBASIC19.4■□□□□ 0.7
DDX39AO00148 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DDX39AO00148 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX39AO00148 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX39AO00148 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX39AO00148 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
DDX39AO00148 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.39■□□□□ 0.7
DDX39AO00148 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
DDX39AO00148 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
DDX39AO00148 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX39AO00148 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX39AO00148 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX39AO00148 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.39■□□□□ 0.7
DDX39AO00148 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
DDX39AO00148 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX39AO00148 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX39AO00148 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DDX39AO00148 AP002414.1-201ENST00000391405 1147 ntBASIC19.39■□□□□ 0.69
DDX39AO00148 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 CRYGEP-201ENST00000412192 528 ntBASIC19.39■□□□□ 0.69
DDX39AO00148 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX39AO00148 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX39AO00148 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX39AO00148 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX39AO00148 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX39AO00148 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms