Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AL390955.1-201ENST00000428694 934 ntBASIC18.49■□□□□ 0.55
CTAGE9A4FU28 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AC024563.2-201ENST00000603282 481 ntBASIC18.49■□□□□ 0.55
CTAGE9A4FU28 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 MIR1238-201ENST00000408483 83 ntBASIC18.48■□□□□ 0.55
CTAGE9A4FU28 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTAGE9A4FU28 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.47■□□□□ 0.55
CTAGE9A4FU28 LINC00554-201ENST00000564841 3011 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms