Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AL157888.1-201ENST00000631930 593 ntBASIC18.79■□□□□ 0.6
CCDC66A2RUB6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 LINC00304-203ENST00000565008 1864 ntBASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AC132872.4-202ENST00000622924 2756 ntBASIC18.79■□□□□ 0.6
CCDC66A2RUB6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC66A2RUB6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AC105917.1-201ENST00000506637 2539 ntBASIC18.77■□□□□ 0.6
CCDC66A2RUB6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ECEL1P3-201ENST00000427961 737 ntBASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 HLA-J-201ENST00000462773 1622 ntBASIC18.77■□□□□ 0.6
CCDC66A2RUB6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC66A2RUB6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC66A2RUB6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.77■□□□□ 0.59
CCDC66A2RUB6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CCDC66A2RUB6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC66A2RUB6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC66A2RUB6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms