Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 REXO1L11P-201ENST00000620964 1927 ntBASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 AP003733.1-201ENST00000491725 852 ntBASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 LINC01451-201ENST00000623792 534 ntBASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF103-CHMP3A0A140T963 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.71■□□□□ 0.26
RNF103-CHMP3A0A140T963 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF103-CHMP3A0A140T963 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 IGHGP-201ENST00000390555 1178 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 KRT18P38-201ENST00000449496 1282 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 HOMER2P1-201ENST00000455653 964 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AL359075.1-203ENST00000462729 1002 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC112698.1-201ENST00000510299 916 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF103-CHMP3A0A140T963 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 AL353692.3-201ENST00000407031 1396 ntBASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 RNF152P1-201ENST00000397754 604 ntBASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TSPY5P-201ENST00000426936 936 ntBASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF103-CHMP3A0A140T963 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms