Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC006449.5-201ENST00000610658 2098 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 DUSP5P2-201ENST00000426873 1033 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 AC034268.1-201ENST00000441047 882 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 DUTP2-201ENST00000519164 463 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 AC022188.1-201ENST00000620960 1664 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 LYSMD4-203ENST00000378904 2122 ntBASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.47□□□□□ -0.41
CHTOPQ9Y3Y2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 AL513523.2-202ENST00000427283 2040 ntBASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHTOPQ9Y3Y2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms