Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 FAM220CP-201ENST00000395253 831 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 AC246785.2-201ENST00000432512 513 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 TSSC2-201ENST00000450217 709 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 AL590326.2-201ENST00000625139 305 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 KRT18P1-202ENST00000452408 1331 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 FLJ38576-201ENST00000623820 2459 ntBASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
RNF11Q9Y3C5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF11Q9Y3C5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF11Q9Y3C5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF11Q9Y3C5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 KRT8P10-201ENST00000450021 1447 ntBASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 MYCLP1-201ENST00000372451 1075 ntBASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF11Q9Y3C5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SLC25A1P3-201ENST00000395415 828 ntBASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 AC103564.2-201ENST00000432853 1299 ntBASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 VENTXP7-201ENST00000475503 772 ntBASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF11Q9Y3C5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms