Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 TFAMP1-201ENST00000412727 736 ntBASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LEMD3Q9Y2U8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 AKAP8P1-201ENST00000434743 1349 ntBASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 RN7SL589P-201ENST00000481268 310 ntBASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.83■□□□□ 0.93
LEMD3Q9Y2U8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LEMD3Q9Y2U8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC079140.1-201ENST00000508039 487 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC243562.1-201ENST00000560672 389 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 RARRES2P8-201ENST00000566335 367 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC015911.4-201ENST00000588022 1070 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC011467.4-201ENST00000594891 528 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC092364.2-202ENST00000597012 1073 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC093512.1-201ENST00000617969 520 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AL161645.1-201ENST00000622716 1255 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 AC012569.1-201ENST00000591191 1524 ntBASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.82■□□□□ 0.92
LEMD3Q9Y2U8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 FAM8A3P-201ENST00000427218 844 ntBASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 AC005237.2-201ENST00000434368 219 ntBASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 AL592309.1-201ENST00000443127 649 ntBASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.81■□□□□ 0.92
LEMD3Q9Y2U8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms