Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RHOQP3-201ENST00000437982 621 ntBASIC16.38■□□□□ 0.21
LHX6Q9UPM6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 AC133485.6-201ENST00000624045 688 ntBASIC16.38■□□□□ 0.21
LHX6Q9UPM6 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 KRT8P47-201ENST00000604727 1398 ntBASIC16.38■□□□□ 0.21
LHX6Q9UPM6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 LINC01126-201ENST00000623515 1646 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 PCDHB18P-201ENST00000524813 2368 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AC005237.2-201ENST00000434368 219 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 KRT18P65-201ENST00000439811 1286 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 SPDYE22P-201ENST00000582158 798 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AC068137.2-201ENST00000605408 478 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 GAPDHP74-202ENST00000632456 782 ntBASIC16.37■□□□□ 0.21
LHX6Q9UPM6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.37■□□□□ 0.21
LHX6Q9UPM6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 AC125807.1-201ENST00000483097 614 ntBASIC16.36■□□□□ 0.21
LHX6Q9UPM6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LHX6Q9UPM6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms