Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
L1RE1Q9UN81 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 COX5BP2-201ENST00000392354 334 ntBASIC18.94■□□□□ 0.62
L1RE1Q9UN81 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 ABCD1P5-201ENST00000445663 754 ntBASIC18.94■□□□□ 0.62
L1RE1Q9UN81 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AC106795.1-205ENST00000512851 1056 ntBASIC18.94■□□□□ 0.62
L1RE1Q9UN81 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AC116407.2-201ENST00000613639 860 ntBASIC18.94■□□□□ 0.62
L1RE1Q9UN81 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
L1RE1Q9UN81 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 AC009078.2-202ENST00000463353 338 ntBASIC18.93■□□□□ 0.62
L1RE1Q9UN81 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 AL160237.2-201ENST00000556165 472 ntBASIC18.93■□□□□ 0.62
L1RE1Q9UN81 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 AC008608.2-201ENST00000606089 416 ntBASIC18.93■□□□□ 0.62
L1RE1Q9UN81 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 TP73-AS1-207ENST00000624167 988 ntBASIC18.93■□□□□ 0.62
L1RE1Q9UN81 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 PCDHA14-201ENST00000506751 2298 ntBASIC18.93■□□□□ 0.62
L1RE1Q9UN81 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
L1RE1Q9UN81 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 DDX43P3-201ENST00000441064 443 ntBASIC18.92■□□□□ 0.62
L1RE1Q9UN81 AP002469.2-201ENST00000531724 424 ntBASIC18.92■□□□□ 0.62
L1RE1Q9UN81 AL355877.3-201ENST00000622820 899 ntBASIC18.92■□□□□ 0.62
L1RE1Q9UN81 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.92■□□□□ 0.62
L1RE1Q9UN81 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms