Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 AP002414.1-201ENST00000391405 1147 ntBASIC16.27■□□□□ 0.2
CTSFQ9UBX1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 AC004790.2-201ENST00000623588 572 ntBASIC16.27■□□□□ 0.2
CTSFQ9UBX1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 AC134043.2-201ENST00000624206 2238 ntBASIC16.27■□□□□ 0.19
CTSFQ9UBX1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTSFQ9UBX1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 AC006538.3-201ENST00000612495 578 ntBASIC16.26■□□□□ 0.19
CTSFQ9UBX1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSFQ9UBX1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 AL590787.1-201ENST00000568856 1315 ntBASIC16.25■□□□□ 0.19
CTSFQ9UBX1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSFQ9UBX1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms