Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 AC007613.1-201ENST00000572811 2597 ntBASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 AC134043.2-201ENST00000624206 2238 ntBASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE7Q9UBL6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 HCG4B-203ENST00000450128 991 ntBASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE7Q9UBL6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AC023274.1-201ENST00000418278 595 ntBASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AC002347.1-201ENST00000569543 541 ntBASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE7Q9UBL6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms