Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 IGHGP-201ENST00000390555 1178 ntBASIC19.34■□□□□ 0.69
CBX8Q9HC52 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 SNORA78-201ENST00000459373 127 ntBASIC19.34■□□□□ 0.69
CBX8Q9HC52 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 AC109462.3-201ENST00000573934 613 ntBASIC19.34■□□□□ 0.69
CBX8Q9HC52 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CBX8Q9HC52 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.33■□□□□ 0.69
CBX8Q9HC52 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 AC022188.1-201ENST00000620960 1664 ntBASIC19.33■□□□□ 0.69
CBX8Q9HC52 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 LINC00554-201ENST00000564841 3011 ntBASIC19.33■□□□□ 0.69
CBX8Q9HC52 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CBX8Q9HC52 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.33■□□□□ 0.69
CBX8Q9HC52 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 AC097374.2-201ENST00000618617 1306 ntBASIC19.33■□□□□ 0.69
CBX8Q9HC52 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
CBX8Q9HC52 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX8Q9HC52 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MYCLP1-201ENST00000372451 1075 ntBASIC19.33■□□□□ 0.68
CBX8Q9HC52 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.68
CBX8Q9HC52 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.33■□□□□ 0.68
CBX8Q9HC52 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX8Q9HC52 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CBX8Q9HC52 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AL353692.3-201ENST00000407031 1396 ntBASIC19.32■□□□□ 0.68
CBX8Q9HC52 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms