Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL020989.1-201ENST00000422979 469 ntBASIC15.16■□□□□ 0.02
CDH20Q9HBT6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 UNC93B7-201ENST00000509439 705 ntBASIC15.16■□□□□ 0.02
CDH20Q9HBT6 AC106795.1-205ENST00000512851 1056 ntBASIC15.16■□□□□ 0.02
CDH20Q9HBT6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 AP000867.4-201ENST00000641616 219 ntBASIC15.16■□□□□ 0.02
CDH20Q9HBT6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 SIGLEC30P-201ENST00000455569 941 ntBASIC15.15■□□□□ 0.02
CDH20Q9HBT6 SCARNA2-201ENST00000458748 420 ntBASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 AL355877.3-201ENST00000622820 899 ntBASIC15.15■□□□□ 0.02
CDH20Q9HBT6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 AC046185.3-201ENST00000623228 1824 ntBASIC15.15■□□□□ 0.02
CDH20Q9HBT6 AC132938.5-201ENST00000624980 1813 ntBASIC15.15■□□□□ 0.02
CDH20Q9HBT6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH20Q9HBT6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.02
CDH20Q9HBT6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AL356309.3-201ENST00000624132 1934 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AKR1C7P-201ENST00000305623 895 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TPM4P1-201ENST00000436100 807 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 FAAHP1-202ENST00000446499 1238 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 EMBP1-201ENST00000458200 901 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 RN7SL510P-201ENST00000581311 263 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AC009053.2-201ENST00000563701 2365 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AC009336.1-201ENST00000608941 1553 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 AL138688.1-201ENST00000624851 1594 ntBASIC15.14■□□□□ 0.01
CDH20Q9HBT6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH20Q9HBT6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms