Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 AC007967.3-201ENST00000434308 558 ntBASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 AC111152.3-201ENST00000569699 673 ntBASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 AC019129.2-201ENST00000609837 1235 ntBASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
POLR2J3Q9H1A7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 AC005915.1-201ENST00000624912 2018 ntBASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 FLJ38576-201ENST00000623820 2459 ntBASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 AC125634.1-201ENST00000438758 1403 ntBASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.02■□□□□ 0.15
POLR2J3Q9H1A7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 KRT18P57-201ENST00000443599 1254 ntBASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 SPDYE13P-201ENST00000445314 798 ntBASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 AC090616.6-201ENST00000582640 721 ntBASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 AC083849.1-201ENST00000615227 514 ntBASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR2J3Q9H1A7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 AC093525.9-201ENST00000624961 1746 ntBASIC16■□□□□ 0.15
POLR2J3Q9H1A7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 AL645929.1-201ENST00000420084 975 ntBASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms