Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.013e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.943e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.633e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-213ENST00000600105 635 ntTSL 317.9■□□□□ 0.469e-7■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-203ENST00000594165 986 ntTSL 317.79■□□□□ 0.449e-7■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.7□□□□□ -0.063e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-210ENST00000598325 1438 ntTSL 514.07□□□□□ -0.163e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.55□□□□□ -0.243e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-202ENST00000594151 995 ntTSL 513.28□□□□□ -0.289e-7■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-218ENST00000601612 1480 ntTSL 212.46□□□□□ -0.423e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTOV1-215ENST00000600793 426 ntTSL 511.77□□□□□ -0.539e-7■■□□□ 12.1
CSTF2TQ9H0L4 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.557e-7■■□□□ 12.1
CSTF2TQ9H0L4 CDRT4-202ENST00000520956 470 ntTSL 43.88□□□□□ -1.797e-7■■□□□ 12.1
CSTF2TQ9H0L4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.041e-9■■□□□ 12.1
CSTF2TQ9H0L4 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)12.37□□□□□ -0.431e-9■■□□□ 12.1
CSTF2TQ9H0L4 NEAT1_3.1-201ENST00000613347 159 ntBASIC10.44□□□□□ -0.741e-323■■□□□ 12.1
CSTF2TQ9H0L4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.06■□□□□ 0.647e-7■■□□□ 12.1
CSTF2TQ9H0L4 SLC6A8-207ENST00000466243 544 ntTSL 212.84□□□□□ -0.352e-13■■□□□ 12.1
CSTF2TQ9H0L4 TNK2-213ENST00000447060 763 ntTSL 316.83■□□□□ 0.282e-6■■□□□ 12.1
CSTF2TQ9H0L4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.02■□□□□ 0.484e-13■■□□□ 12.1
CSTF2TQ9H0L4 HUWE1-204ENST00000426907 4805 ntTSL 58.63□□□□□ -1.034e-18■■□□□ 12.1
CSTF2TQ9H0L4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.5□□□□□ -1.534e-18■■□□□ 12.1
CSTF2TQ9H0L4 GPX4-208ENST00000592940 1184 ntTSL 520.9■□□□□ 0.941e-7■■□□□ 12.1
CSTF2TQ9H0L4 GPX4-203ENST00000585480 501 ntTSL 214.12□□□□□ -0.151e-7■■□□□ 12.1
CSTF2TQ9H0L4 GPX4-204ENST00000587648 536 ntTSL 28.33□□□□□ -1.081e-7■■□□□ 12.1
CSTF2TQ9H0L4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.721e-13■■□□□ 12.1
CSTF2TQ9H0L4 C2orf72-203ENST00000477463 579 ntTSL 411□□□□□ -0.651e-13■■□□□ 12.1
CSTF2TQ9H0L4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.134e-8■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-208ENST00000450000 574 ntTSL 420.8■□□□□ 0.928e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-209ENST00000463244 545 ntTSL 419.74■□□□□ 0.758e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-225ENST00000545934 565 ntTSL 415.84■□□□□ 0.138e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.168e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.248e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.25□□□□□ -0.298e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-223ENST00000544669 1800 ntTSL 512.16□□□□□ -0.468e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-218ENST00000537641 1728 ntTSL 511.4□□□□□ -0.588e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-211ENST00000477890 1234 ntTSL 511.17□□□□□ -0.628e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-217ENST00000537162 801 ntTSL 39.19□□□□□ -0.948e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-222ENST00000544585 722 ntTSL 27.51□□□□□ -1.218e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-216ENST00000536548 598 ntTSL 47.35□□□□□ -1.238e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-214ENST00000535222 940 ntTSL 37.22□□□□□ -1.258e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.94□□□□□ -1.38e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-219ENST00000539952 953 ntTSL 55.69□□□□□ -1.58e-9■■□□□ 12.1
CSTF2TQ9H0L4 CPSF7-210ENST00000474684 635 ntTSL 35.56□□□□□ -1.528e-9■■□□□ 12.1
CSTF2TQ9H0L4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.23■□□□□ 0.511e-7■■□□□ 12.1
CSTF2TQ9H0L4 FN3K-205ENST00000574496 594 ntTSL 318.75■□□□□ 0.597e-10■■□□□ 12.1
CSTF2TQ9H0L4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.026e-9■■□□□ 12.1
CSTF2TQ9H0L4 TMEM51-206ENST00000451326 766 ntTSL 313.7□□□□□ -0.226e-9■■□□□ 12.1
CSTF2TQ9H0L4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.246e-9■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 14e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-215ENST00000592776 772 ntTSL 520.74■□□□□ 0.914e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC10.39□□□□□ -0.754e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-203ENST00000353319 1542 ntTSL 1 (best) BASIC9.41□□□□□ -0.94e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-208ENST00000589216 646 ntTSL 39.2□□□□□ -0.944e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC8.91□□□□□ -0.984e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-211ENST00000591305 876 ntTSL 36.8□□□□□ -1.324e-8■■□□□ 12.1
CSTF2TQ9H0L4 PTPN2-214ENST00000592059 577 ntTSL 45.03□□□□□ -1.64e-8■■□□□ 12.1
CSTF2TQ9H0L4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.86■□□□□ 0.775e-9■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-209ENST00000454902 722 ntTSL 1 (best)19.39■□□□□ 0.692e-6■■□□□ 12.1
CSTF2TQ9H0L4 EPS15L1-213ENST00000599790 1921 ntTSL 518.78■□□□□ 0.65e-9■■□□□ 12.1
CSTF2TQ9H0L4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.562e-6■■□□□ 12.1
CSTF2TQ9H0L4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.452e-6■■□□□ 12.1
CSTF2TQ9H0L4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.59■□□□□ 0.412e-6■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-213ENST00000471431 569 ntTSL 317.37■□□□□ 0.372e-6■■□□□ 12.1
CSTF2TQ9H0L4 ZDHHC7-202ENST00000344861 2727 ntTSL 1 (best)16.09■□□□□ 0.175e-9■■□□□ 12.1
CSTF2TQ9H0L4 GGT1-220ENST00000451366 853 ntTSL 513.94□□□□□ -0.182e-6■■□□□ 12.1
CSTF2TQ9H0L4 GGT1-213ENST00000425895 2632 ntTSL 213.42□□□□□ -0.262e-6■■□□□ 12.1
CSTF2TQ9H0L4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.272e-6■■□□□ 12.1
CSTF2TQ9H0L4 MMP25-AS1-201ENST00000570949 491 ntTSL 313.23□□□□□ -0.292e-6■■□□□ 12.1
CSTF2TQ9H0L4 GGT1-219ENST00000447416 743 ntTSL 313.05□□□□□ -0.322e-6■■□□□ 12.1
CSTF2TQ9H0L4 ZDHHC7-208ENST00000569488 620 ntTSL 312.96□□□□□ -0.335e-9■■□□□ 12.1
CSTF2TQ9H0L4 MMP25-AS1-207ENST00000573878 483 ntTSL 312.88□□□□□ -0.352e-6■■□□□ 12.1
CSTF2TQ9H0L4 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.76□□□□□ -0.372e-6■■□□□ 12.1
CSTF2TQ9H0L4 GGT1-216ENST00000432867 747 ntTSL 512.63□□□□□ -0.392e-6■■□□□ 12.1
CSTF2TQ9H0L4 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.445e-9■■□□□ 12.1
CSTF2TQ9H0L4 GGT1-214ENST00000428855 874 ntTSL 312.23□□□□□ -0.452e-6■■□□□ 12.1
CSTF2TQ9H0L4 HIGD1A-205ENST00000470543 983 ntTSL 212.02□□□□□ -0.492e-6■■□□□ 12.1
CSTF2TQ9H0L4 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.492e-6■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-205ENST00000393496 3190 ntTSL 210.91□□□□□ -0.662e-6■■□□□ 12.1
CSTF2TQ9H0L4 LMO7-204ENST00000377499 3472 ntTSL 210.86□□□□□ -0.672e-6■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)9.42□□□□□ -0.95e-9■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-203ENST00000354186 10586 ntAPPRIS ALT2 TSL 58.98□□□□□ -0.972e-6■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)8.88□□□□□ -0.995e-9■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)8.83□□□□□ -15e-9■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-202ENST00000503810 3782 ntTSL 58.7□□□□□ -1.025e-9■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)8.65□□□□□ -1.025e-9■■□□□ 12.1
CSTF2TQ9H0L4 RHOQ-203ENST00000465198 318 ntTSL 38.17□□□□□ -1.12e-6■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.03□□□□□ -1.122e-6■■□□□ 12.1
CSTF2TQ9H0L4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.252e-6■■□□□ 12.1
CSTF2TQ9H0L4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.35e-9■■□□□ 12.1
CSTF2TQ9H0L4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.342e-6■■□□□ 12.1
CSTF2TQ9H0L4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.422e-6■■□□□ 12.1
CSTF2TQ9H0L4 AC099329.1-201ENST00000625589 539 ntTSL 55.25□□□□□ -1.572e-6■■□□□ 12.1
CSTF2TQ9H0L4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.124e-6■■□□□ 12
CSTF2TQ9H0L4 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.18□□□□□ -0.464e-6■■□□□ 12
CSTF2TQ9H0L4 DENND4C-208ENST00000602708 551 ntTSL 46.63□□□□□ -1.354e-6■■□□□ 12
CSTF2TQ9H0L4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.169e-7■■□□□ 12
CSTF2TQ9H0L4 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.59e-7■■□□□ 12
CSTF2TQ9H0L4 SLC38A10-209ENST00000546352 580 ntTSL 511.14□□□□□ -0.632e-6■■□□□ 12
CSTF2TQ9H0L4 KIDINS220-210ENST00000496383 3220 ntTSL 56.76□□□□□ -1.337e-10■■□□□ 12
Retrieved 100 of 19,151 protein–RNA pairs in 193.7 ms