Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC3Q9BY71 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 CNN2P11-201ENST00000429351 262 ntBASIC17.99■□□□□ 0.47
LRRC3Q9BY71 FAM58CP-201ENST00000435741 640 ntBASIC17.99■□□□□ 0.47
LRRC3Q9BY71 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 AC092902.6-201ENST00000641783 218 ntBASIC17.99■□□□□ 0.47
LRRC3Q9BY71 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC3Q9BY71 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 METTL21AP1-201ENST00000438852 635 ntBASIC17.98■□□□□ 0.47
LRRC3Q9BY71 AC087163.2-201ENST00000457299 853 ntBASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC3Q9BY71 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.97■□□□□ 0.47
LRRC3Q9BY71 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 AC091812.2-201ENST00000619081 385 ntBASIC17.97■□□□□ 0.47
LRRC3Q9BY71 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 AC090340.1-201ENST00000620778 4980 ntBASIC17.97■□□□□ 0.47
LRRC3Q9BY71 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms