Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
RPAP1Q9BWH6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
RPAP1Q9BWH6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 NCF1C-201ENST00000438382 1427 ntBASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 KLF4P1-201ENST00000412782 1185 ntBASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 MTDHP5-201ENST00000598980 586 ntBASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 AC002310.6-201ENST00000624451 1377 ntBASIC20.95■□□□□ 0.94
RPAP1Q9BWH6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AC004817.3-201ENST00000602957 2129 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AC148477.5-201ENST00000625164 1645 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 MCCD1P2-201ENST00000423228 335 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 AC134684.3-201ENST00000641758 218 ntBASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP1Q9BWH6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 AC079781.4-201ENST00000641908 219 ntBASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP1Q9BWH6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 AC023274.1-201ENST00000418278 595 ntBASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 AC108073.2-201ENST00000464002 357 ntBASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms