Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 UNC93B7-201ENST00000509439 705 ntBASIC16.1■□□□□ 0.17
TM9SF2Q99805 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.1■□□□□ 0.17
TM9SF2Q99805 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 AC068418.2-201ENST00000577309 3703 ntBASIC16.1■□□□□ 0.17
TM9SF2Q99805 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF2Q99805 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF2Q99805 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 CROCCP2-202ENST00000412962 2773 ntBASIC16.09■□□□□ 0.17
TM9SF2Q99805 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 KRT18P65-201ENST00000439811 1286 ntBASIC16.09■□□□□ 0.17
TM9SF2Q99805 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 AC068472.1-201ENST00000474589 881 ntBASIC16.09■□□□□ 0.17
TM9SF2Q99805 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF2Q99805 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF2Q99805 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TM9SF2Q99805 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF2Q99805 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF2Q99805 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF2Q99805 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.08■□□□□ 0.17
TM9SF2Q99805 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TM9SF2Q99805 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF2Q99805 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TM9SF2Q99805 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 NUS1P2-201ENST00000417358 873 ntBASIC16.08■□□□□ 0.16
TM9SF2Q99805 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 AP005901.3-202ENST00000581653 237 ntBASIC16.08■□□□□ 0.16
TM9SF2Q99805 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms