Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AL353801.3-201ENST00000609898 542 ntBASIC14.31□□□□□ -0.12
S1PR3Q99500 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.31□□□□□ -0.12
S1PR3Q99500 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
S1PR3Q99500 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
S1PR3Q99500 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 AL138831.2-201ENST00000606564 490 ntBASIC14.3□□□□□ -0.12
S1PR3Q99500 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 KRT18P1-202ENST00000452408 1331 ntBASIC14.3□□□□□ -0.12
S1PR3Q99500 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.3□□□□□ -0.12
S1PR3Q99500 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
S1PR3Q99500 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.3□□□□□ -0.12
S1PR3Q99500 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.3□□□□□ -0.12
S1PR3Q99500 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
S1PR3Q99500 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
S1PR3Q99500 AC022211.2-201ENST00000585075 2527 ntBASIC14.3□□□□□ -0.12
S1PR3Q99500 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 AC007326.2-201ENST00000624224 7579 ntBASIC14.29□□□□□ -0.12
S1PR3Q99500 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
S1PR3Q99500 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.29□□□□□ -0.12
S1PR3Q99500 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 UPK3BP1-201ENST00000428678 509 ntBASIC14.29□□□□□ -0.12
S1PR3Q99500 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 AC009533.2-201ENST00000543664 586 ntBASIC14.29□□□□□ -0.12
S1PR3Q99500 AC109462.3-201ENST00000573934 613 ntBASIC14.29□□□□□ -0.12
S1PR3Q99500 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 AC093458.2-201ENST00000623150 629 ntBASIC14.29□□□□□ -0.12
S1PR3Q99500 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
S1PR3Q99500 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
S1PR3Q99500 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
S1PR3Q99500 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
S1PR3Q99500 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms