Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 AL121829.2-201ENST00000620908 328 ntBASIC16.32■□□□□ 0.2
NR1H4Q96RI1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC090192.1-201ENST00000517740 490 ntBASIC16.31■□□□□ 0.2
NR1H4Q96RI1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC104771.1-201ENST00000603335 964 ntBASIC16.31■□□□□ 0.2
NR1H4Q96RI1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.31■□□□□ 0.2
NR1H4Q96RI1 AC132938.6-201ENST00000623828 1655 ntBASIC16.3■□□□□ 0.2
NR1H4Q96RI1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AL355802.2-201ENST00000402069 882 ntBASIC16.3■□□□□ 0.2
NR1H4Q96RI1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H4Q96RI1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms