Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC016396.2-201ENST00000562575 1417 ntBASIC15.82■□□□□ 0.12
SNX18Q96RF0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX18Q96RF0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SNX18Q96RF0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX18Q96RF0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SNX18Q96RF0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 HBZP1-201ENST00000354915 429 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 IER3-202ENST00000376377 1350 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 AC096633.1-201ENST00000422446 749 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 KRT18P38-201ENST00000449496 1282 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.81■□□□□ 0.12
SNX18Q96RF0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SNX18Q96RF0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX18Q96RF0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MTCL1P1-201ENST00000446207 792 ntBASIC15.8■□□□□ 0.12
SNX18Q96RF0 AC092597.1-201ENST00000487352 616 ntBASIC15.8■□□□□ 0.12
SNX18Q96RF0 FAM86EP-206ENST00000510506 987 ntBASIC15.8■□□□□ 0.12
SNX18Q96RF0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 AC093458.2-201ENST00000623150 629 ntBASIC15.8■□□□□ 0.12
SNX18Q96RF0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX18Q96RF0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX18Q96RF0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNX18Q96RF0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.79■□□□□ 0.12
SNX18Q96RF0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms