Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 ACTG1P4-201ENST00000425123 1122 ntBASIC15.34■□□□□ 0.05
APH1AQ96BI3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APH1AQ96BI3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
APH1AQ96BI3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.33■□□□□ 0.05
APH1AQ96BI3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.33■□□□□ 0.05
APH1AQ96BI3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
APH1AQ96BI3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
APH1AQ96BI3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 LINC00982-205ENST00000420957 435 ntBASIC15.33■□□□□ 0.04
APH1AQ96BI3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 AC105339.3-201ENST00000560043 636 ntBASIC15.33■□□□□ 0.04
APH1AQ96BI3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 MIR1199-201ENST00000621445 119 ntBASIC15.33■□□□□ 0.04
APH1AQ96BI3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.33■□□□□ 0.04
APH1AQ96BI3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1AQ96BI3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.33■□□□□ 0.04
APH1AQ96BI3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 LINC00896-202ENST00000609602 2128 ntBASIC15.32■□□□□ 0.04
APH1AQ96BI3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 AL139424.1-201ENST00000607572 797 ntBASIC15.32■□□□□ 0.04
APH1AQ96BI3 MIR7706-201ENST00000613747 67 ntBASIC15.32■□□□□ 0.04
APH1AQ96BI3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 AC016396.2-201ENST00000562575 1417 ntBASIC15.32■□□□□ 0.04
APH1AQ96BI3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1AQ96BI3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1AQ96BI3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms