Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC1Q92922 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC1Q92922 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC1Q92922 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 ALG1L8P-201ENST00000533887 760 ntBASIC21.93■■□□□ 1.1
SMARCC1Q92922 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 AC008267.7-201ENST00000624570 1194 ntBASIC21.93■■□□□ 1.1
SMARCC1Q92922 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC1Q92922 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
SMARCC1Q92922 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC1Q92922 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.92■■□□□ 1.1
SMARCC1Q92922 HLA-J-202ENST00000469281 1241 ntBASIC21.92■■□□□ 1.1
SMARCC1Q92922 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC1Q92922 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.92■■□□□ 1.1
SMARCC1Q92922 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 AL353732.1-201ENST00000569618 1459 ntBASIC21.91■■□□□ 1.1
SMARCC1Q92922 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.91■■□□□ 1.1
SMARCC1Q92922 CRB3P1-201ENST00000449338 276 ntBASIC21.91■■□□□ 1.1
SMARCC1Q92922 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 AL358472.5-202ENST00000641448 1267 ntBASIC21.91■■□□□ 1.1
SMARCC1Q92922 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC1Q92922 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC1Q92922 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 MIR346-201ENST00000362234 95 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 HCG4-201ENST00000418983 998 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 AP005018.1-201ENST00000525475 301 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 AP000842.3-202ENST00000569238 1080 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 AC027307.3-201ENST00000594262 1100 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms