Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTRA1Q92743 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTRA1Q92743 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTRA1Q92743 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTRA1Q92743 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HTRA1Q92743 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.07■□□□□ 0.16
HTRA1Q92743 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HTRA1Q92743 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.06■□□□□ 0.16
HTRA1Q92743 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HTRA1Q92743 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.06■□□□□ 0.16
HTRA1Q92743 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.06■□□□□ 0.16
HTRA1Q92743 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 AP000550.4-202ENST00000639755 178 ntBASIC16.06■□□□□ 0.16
HTRA1Q92743 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HTRA1Q92743 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.06■□□□□ 0.16
HTRA1Q92743 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 AGGF1P2-201ENST00000426656 2106 ntBASIC16.06■□□□□ 0.16
HTRA1Q92743 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTRA1Q92743 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.06■□□□□ 0.16
HTRA1Q92743 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.05■□□□□ 0.16
HTRA1Q92743 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 AC006116.8-202ENST00000587620 1550 ntBASIC16.05■□□□□ 0.16
HTRA1Q92743 AL136379.1-201ENST00000623471 2642 ntBASIC16.05■□□□□ 0.16
HTRA1Q92743 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.05■□□□□ 0.16
HTRA1Q92743 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.05■□□□□ 0.16
HTRA1Q92743 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTRA1Q92743 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HTRA1Q92743 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HTRA1Q92743 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HTRA1Q92743 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 AC005332.1-201ENST00000577698 1310 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms