Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT9Q92600 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT9Q92600 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.97■□□□□ 0.15
CNOT9Q92600 STK19B-204ENST00000512515 211 ntBASIC15.97■□□□□ 0.15
CNOT9Q92600 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT9Q92600 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.97■□□□□ 0.15
CNOT9Q92600 AC012615.1-201ENST00000565797 1299 ntBASIC15.97■□□□□ 0.15
CNOT9Q92600 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT9Q92600 AC099336.1-202ENST00000602961 463 ntBASIC15.97■□□□□ 0.15
CNOT9Q92600 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.97■□□□□ 0.15
CNOT9Q92600 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT9Q92600 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CNOT9Q92600 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT9Q92600 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CNOT9Q92600 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 AC093525.9-201ENST00000624961 1746 ntBASIC15.97■□□□□ 0.15
CNOT9Q92600 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT9Q92600 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC009336.1-201ENST00000608941 1553 ntBASIC15.96■□□□□ 0.15
CNOT9Q92600 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CNOT9Q92600 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT9Q92600 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CNOT9Q92600 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC114341.1-201ENST00000618070 349 ntBASIC15.96■□□□□ 0.15
CNOT9Q92600 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 AC073592.5-201ENST00000624854 528 ntBASIC15.96■□□□□ 0.15
CNOT9Q92600 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT9Q92600 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CNOT9Q92600 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT9Q92600 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT9Q92600 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT9Q92600 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CNOT9Q92600 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CNOT9Q92600 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.96■□□□□ 0.14
CNOT9Q92600 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT9Q92600 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CNOT9Q92600 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CNOT9Q92600 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CNOT9Q92600 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
CNOT9Q92600 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNOT9Q92600 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CNOT9Q92600 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT9Q92600 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT9Q92600 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT9Q92600 POM121L3P-201ENST00000419331 1163 ntBASIC15.95■□□□□ 0.14
CNOT9Q92600 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms