Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL365203.3-201ENST00000609742 2057 ntBASIC15.29■□□□□ 0.04
AP3S1Q92572 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
AP3S1Q92572 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 PAUPAR-201ENST00000630360 2965 ntBASIC15.28■□□□□ 0.04
AP3S1Q92572 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.28■□□□□ 0.04
AP3S1Q92572 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
AP3S1Q92572 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.28■□□□□ 0.04
AP3S1Q92572 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.28■□□□□ 0.04
AP3S1Q92572 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.28■□□□□ 0.04
AP3S1Q92572 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
AP3S1Q92572 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 AC112497.1-201ENST00000624824 639 ntBASIC15.28■□□□□ 0.04
AP3S1Q92572 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S1Q92572 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S1Q92572 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
AP3S1Q92572 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.27■□□□□ 0.04
AP3S1Q92572 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S1Q92572 MIR4674-201ENST00000582457 87 ntBASIC15.27■□□□□ 0.04
AP3S1Q92572 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.27■□□□□ 0.04
AP3S1Q92572 AC110285.5-201ENST00000611501 352 ntBASIC15.27■□□□□ 0.04
AP3S1Q92572 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
AP3S1Q92572 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
AP3S1Q92572 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.27■□□□□ 0.03
AP3S1Q92572 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.27■□□□□ 0.03
AP3S1Q92572 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.27■□□□□ 0.03
AP3S1Q92572 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.27■□□□□ 0.03
AP3S1Q92572 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.27■□□□□ 0.03
AP3S1Q92572 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S1Q92572 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms