Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AC113404.2-201ENST00000507884 177 ntBASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AC233263.1-201ENST00000578059 224 ntBASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 NCF1B-203ENST00000435988 1254 ntBASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SLC25A1P4-201ENST00000567977 778 ntBASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 AC073195.1-201ENST00000607241 877 ntBASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L1Q8WWY6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L1Q8WWY6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
MBD3L1Q8WWY6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms